An efficient system for preprocessing confocal corneal images for subsequent analysis

Book chapter

Sharif, M., Qahwaji, Rami, Hayajneh, Sofyan, Ipson, Stanley, Alzubaidi, Rania and Brahma, Arun 2014. An efficient system for preprocessing confocal corneal images for subsequent analysis. in: 2014 14th UK Workshop on Computational Intelligence (UKCI) IEEE.
AuthorsSharif, M., Qahwaji, Rami, Hayajneh, Sofyan, Ipson, Stanley, Alzubaidi, Rania and Brahma, Arun
Abstract

A confocal microscope provides a sequence of images of the various corneal layers and structures at different depths from which medical clinicians can extract clinical information on the state of health of the patient's cornea. Preprocessing the confocal corneal images to make them suitable for analysis is very challenging due the nature of these images and the amount of the noise present in them. This paper presents an efficient preprocessing approach for confocal corneal images consisting of three main steps including enhancement, binarisation and refinement. Improved visualisation, cell counts and measurements of cell properties have been achieved through this system and an interactive graphical user interface has been developed.

KeywordsConfocal microscope; Cornea; Preprocessing
Book title2014 14th UK Workshop on Computational Intelligence (UKCI)
Year2014
PublisherIEEE
Publication dates
Print20 Oct 2014
Publication process dates
Deposited07 Mar 2017
Accepted2014
Event14th UK Workshop on Computational Intelligence (UKCI)
ISBN978-1-4799-5538-1
Digital Object Identifier (DOI)https://doi.org/10.1109/UKCI.2014.6930188
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© 2014 IEEE. Personal use of this material is permitted. Permission from IEEE must be obtained for all other uses, in any current or future media, including reprinting/republishing this material for advertising or promotional purposes, creating new collective works, for resale or redistribution to servers or lists, or reuse of any copyrighted component of this work in other works.

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Sharif, M., Naeem, U., Islam, S. and Karami, A. 2018. Functional Connectivity Evaluation for Infant EEG Signals based on Artificial Neural Network. Arai, Kohei, Kapoor, Supriya and Bhatia, Rahul (ed.) Intelligent Systems Conference (IntelliSys) 2018. London, UK 06 - 07 Sep 2018 Springer, Cham. https://doi.org/10.1007/978-3-030-01057-7_34
The Application of a Semantic-Based Process Mining Framework on a Learning Process Domain
Okoye, Kingsley, Islam, S., Naeem, U., Sharif, M., Azam, Muhammad Awais and Karami, A. 2018. The Application of a Semantic-Based Process Mining Framework on a Learning Process Domain. Arai, Kohei, Kapoor, Supriya and Bhatia, Rahul (ed.) Intelligent Systems Conference (IntelliSys) 2018. London, UK 06 - 07 Sep 2018 Springer, Cham. https://doi.org/10.1007/978-3-030-01054-6_96
Taskification – Gamification of Tasks
Naeem, U., Islam, S., Sharif, M., Sudakov, Sergey and Azam, Awais 2017. Taskification – Gamification of Tasks. in: Proceedings of the 2017 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2017 ACM International Symposium on Wearable Computers Association for Computing Machinery (ACM). pp. 631-634
SignalSense - Towards Quality Service
Islam, S., Sharif, M., Naeem, U. and Geehan, James 2017. SignalSense - Towards Quality Service. in: Proceedings of the 2017 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2017 ACM International Symposium on Wearable Computers Association for Computing Machinery (ACM). pp. 627-630
CrimeSafe - Helping you stay safe
Islam, S., Naeem, U., Sharif, M. and Dovnarovic, Arnold 2017. CrimeSafe - Helping you stay safe. in: Proceedings of the 2017 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2017 ACM International Symposium on Wearable Computers Association for Computing Machinery (ACM). pp. 642-645
The Future of Enterprise Security with Regards to Mobile Technology and Applications
Tagoe, F. T. and Sharif, M. 2017. The Future of Enterprise Security with Regards to Mobile Technology and Applications. in: Jahankhani, Hamid, Carlile, Alex, Emm, David, Hosseinian-Far, Amin, Brown, Guy, Sexton, Graham and Jamal, Arshad (ed.) Global Security, Safety and Sustainability - The Security Challenges of the Connected World. ICGS3 2017 Proceedings Springer International Publishing.
Actor-Network Theory as a Framework to Analyse Technology Acceptance Model’s External Variables: The Case of Autonomous Vehicles
Seuwou, Patrice, Banissi, Ebad, Ubakanma, George, Sharif, M. and Healey, Ann 2017. Actor-Network Theory as a Framework to Analyse Technology Acceptance Model’s External Variables: The Case of Autonomous Vehicles. in: Jahankhani, Hamid, Carlile, Alex, Emm, David, Hosseinian-Far, Amin, Brown, Guy, Sexton, Graham and Jamal, Arshad (ed.) Global Security, Safety and Sustainability - The Security Challenges of the Connected World. ICGS3 2017 Proceedings Springer International Publishing.
Artificial Neural Network-Based System for PET Volume Segmentation
Sharif, M., Abbod, Maysam, Amira, Abbes and Zaidi, Habib 2010. Artificial Neural Network-Based System for PET Volume Segmentation. International Journal of Biomedical Imaging. 2010 (105610). https://doi.org/10.1155/2010/105610
Artificial Neural Network-Statistical Approach for PET Volume Analysis and Classification
Sharif, M., Abbod, Maysam, Amira, Abbes and Zaidi, Habib 2012. Artificial Neural Network-Statistical Approach for PET Volume Analysis and Classification. Advances in Fuzzy Systems. 2012 (327861). https://doi.org/10.1155/2012/327861
Machine Learning Optimisation for Realistic 2D and 3D PET-CT Phantom Study
Sharif, M., Abbod, Maysam, Sonoda, Luke I. and Sanghera, Bal 2013. Machine Learning Optimisation for Realistic 2D and 3D PET-CT Phantom Study. British Journal of Applied Science & Technology. 4 (4), pp. 634-649. https://doi.org/10.9734/bjast/2014/5084
Preparation of 2D sequences of corneal images for 3D model building
Elbita, Abdulhakim, Qahwaji, Rami, Ipson, Stanley, Sharif, M. and Ghanchi, Faruque 2015. Preparation of 2D sequences of corneal images for 3D model building. Computer Methods and Programs in Biomedicine. 114 (2), pp. 194-205. https://doi.org/10.1016/j.cmpb.2014.01.009
Medical image classification based on artificial intelligence approaches: A practical study on normal and abnormal confocal corneal images
Sharif, M., Qahwaji, R., Ipson, S. and Brahma, A. 2015. Medical image classification based on artificial intelligence approaches: A practical study on normal and abnormal confocal corneal images. Applied Soft Computing. 36 (Nov.), pp. 269-282. https://doi.org/10.1016/j.asoc.2015.07.019
An efficient intelligent analysis system for confocal corneal endothelium images
Sharif, M., Qahwaji, R., Shahamatnia, E., Alzubaidi, R., Ipson, S. and Brahma, A. 2015. An efficient intelligent analysis system for confocal corneal endothelium images. Computer Methods and Programs in Biomedicine. 122 (3), pp. 421-436. https://doi.org/10.1016/j.cmpb.2015.09.003
In Vivo Confocal Microscopic Corneal Images in health and disease with an emphasis on extracting features and visual signatures for corneal diseases: A review study
Alzubaidi, Rania, Sharif, M., Qahwaji, Rami, Ipson, Stanley and Brahma, Arun 2015. In Vivo Confocal Microscopic Corneal Images in health and disease with an emphasis on extracting features and visual signatures for corneal diseases: A review study. British Journal of Ophthalmology. 100 (1), pp. 41-55. https://doi.org/10.1136/bjophthalmol-2015-306934
A Mutlimodal Approach to Measure the Levels Distraction of Pedestrians using Mobile Sensing
Pizzamiglio, S., Naeem, U., ur Réhman, Shafiq, Sharif, M., Abdalla, H. and Turner, D. 2017. A Mutlimodal Approach to Measure the Levels Distraction of Pedestrians using Mobile Sensing. Procedia Computer Science. 113, pp. 89-96. https://doi.org/10.1016/j.procs.2017.08.297